Polymer Models (Application)
=========================================================

This section mirrors :doc:`Polymer Models (Theory) <../polymer_models/index>`, but from the
practical side. For each model it provides (1) a few quick-start examples showing how to build
the object and pull out the quantities you are likely to need, and (2) the full autogenerated
code reference (every public method, its arguments, and return types).

If you are after the maths, parameters, and references for a model, see the theory section; if
you just want to use it, you are in the right place.

.. list-table::
   :header-rows: 1
   :widths: 30 25 45

   * - Model
     - Class
     - Import
   * - :doc:`Analytical Flory Random Coil <afrc>`
     - ``AnalyticalFRC``
     - ``from afrc import AnalyticalFRC``
   * - :doc:`Freely jointed chain <freely_jointed_chain>`
     - ``FreelyJointedChain``
     - ``from afrc.polymer_models.fjc import FreelyJointedChain``
   * - :doc:`Freely rotating chain <freely_rotating_chain>`
     - ``FreelyRotatingChain``
     - ``from afrc.polymer_models.frc import FreelyRotatingChain``
   * - :doc:`Worm-like chain (Zhou) <worm_like_chain_zhou>`
     - ``WormLikeChain``
     - ``from afrc.polymer_models.wlc import WormLikeChain``
   * - :doc:`Worm-like chain (O'Brien) <worm_like_chain_obrien>`
     - ``WormLikeChain2``
     - ``from afrc.polymer_models.wlc2 import WormLikeChain2``
   * - :doc:`Self-avoiding walk <self_avoiding_walk>`
     - ``SAW``
     - ``from afrc.polymer_models.saw import SAW``
   * - :doc:`nu-dependent SAW <nu_dependent_saw>`
     - ``NuDepSAW``
     - ``from afrc.polymer_models.nudep_saw import NuDepSAW``

.. toctree::
   :maxdepth: 1
   :caption: Models

   afrc
   freely_jointed_chain
   freely_rotating_chain
   worm_like_chain_zhou
   worm_like_chain_obrien
   self_avoiding_walk
   nu_dependent_saw